PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP036288.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 231aa MW: 26869.2 Da PI: 7.651 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.4 | 2.8e-19 | 72 | 125 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+ ++t++qle Le+ F ++ +++ +++ +L+++lgL+ rq+ vWFqNrRa++k PCP036288.1 72 KKKRLTSDQLESLERSFLEEIKLDPDRKMKLSSELGLQPRQIAVWFQNRRARWK 125 56679************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 117.6 | 7e-38 | 72 | 161 | 2 | 91 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 kk+rl+++q+++LE+sF ee kL+p+rK++l++eLglqprq+avWFqnrRAR+k+kqlE+ y+aLk++yd +++e+e+L++ev +L++ l PCP036288.1 72 KKKRLTSDQLESLERSFLEEIKLDPDRKMKLSSELGLQPRQIAVWFQNRRARWKAKQLERLYDALKQEYDVVSKEKEKLQEEVMKLKTIL 161 9****************9999*****************************************************************9766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MDWNTNLRHL VSRPEPSFGF LYNYNSYDHY PPGLEMKHQA MISETSSHGG LVPGMMDRNN 60 HQSSYGCSSQ DKKKRLTSDQ LESLERSFLE EIKLDPDRKM KLSSELGLQP RQIAVWFQNR 120 RARWKAKQLE RLYDALKQEY DVVSKEKEKL QEEVMKLKTI LRDEVARKQV SIGYTEISGE 180 ETVESTSVSI RSANKARGTN QHQIAECNYL YNVEEYNPVS PPFWGNLPSY P |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 72 | 101 | KKKRLTSDQLESLERSFLEEIKLDPDRKMK |
2 | 120 | 128 | RRARWKAKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03790.1 | 4e-50 | HD-ZIP family protein |