PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP036218.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 282aa    MW: 32494.2 Da    PI: 5.8438
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP036218.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.33.6e-13115159347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ +  ++G+g+W+ I+r    ++t+ q+ s+ qky
      PCP036218.1 115 PWTQEEHRRFLMGLLKYGKGDWRNISRNYVVTKTPTQVASHAQKY 159
                      7*****************************9*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
METLYFFQES QGSEWTKEEN KMFESALAMF DEKSPDRFQR VAEMIPGKTV IDVMKQYQEL  60
EEDVCEIESG RFPIPPGYPQ SYFRLELGDD RDFDANRKRP LAARGSEQER RKGIPWTQEE  120
HRRFLMGLLK YGKGDWRNIS RNYVVTKTPT QVASHAQKYF MRQHSGGKDK RRPSIHDITT  180
VNLTSDAQSE TNMPPSDQFL PEQKSTESLN VLLDWNAADD EGAAMGFDST HGNLFDPSPY  240
DVDADGIKMQ LQKLYSRAHY AAHATPQNSL YLMQSARHQI HG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11280.12e-87MYB family protein