PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP035554.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 705aa MW: 78131.4 Da PI: 5.0957

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP035554.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.9	4.3e-14	477	523	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L+ PCP035554.1 477 NHVLAERRRREKLNERFIILRSLVPFV-----TKMDKASILGDTIEYVKQLR 523 7999********************8.....8***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 705 aa Download sequence
MALPPPSSSR LRGMLQASVQ SVQWTYSLFW QICPQQGILV WSDGYYNGAI KTRKTVQPME 60 VSAEEASLQR SQQLRELYDS LSAGETNQPP ARRPCASLSP EDLTESEWFY LMCVSFSFPP 120 GVGLPGKAYA RRQHVWLTGA NEVDSKTFSR AILAKSARIQ TVVCIPLLGG VVEFGTTERV 180 PEDHAFVQRV KTFFVDHHHP PPPKPALSEH STSNPTTSSD HPHFHSSNLL PAMSTDPPLN 240 AAQEDEEDEE DDNQEEDDEA ESDSEAETGP NGGAVVPAAN PPQALAAVAE PSELMQLEMS 300 EDIRLGSPDD ASNNLDSDFH LLALSQSRNP ADQQRQADSY RAESTRRWPS VQEPLSSGLQ 360 PPHAGPLALE ELTNDDTHYS ETVSTILQGQ STRWTMNSST DYAVCSTQSA FAKWSSRVDH 420 HLLMPAEGTS QWLLKYILFS VPFLHSKYRD ENSPKSHEGE ASTRLRKGTP QDELSANHVL 480 AERRRREKLN ERFIILRSLV PFVTKMDKAS ILGDTIEYVK QLRKKIQDLE ARNVPMEDDQ 540 RSRSSGEIQR SSSCKDLRSG LPVVERTQAG HGSEKRKLRI VEGSGGVAIG KPKAMEDLPP 600 PLPPPPPQPE PSPTPMVTGT SLEVSIIESD GLLELQCPYR EGLLLDVMQT LRELRIETTV 660 VQSSLNNGYF VAELRAKVKD NVSGKKISIT EVKRVINQII PQSDS

Sequence ? help Back to Top

Protein Sequence Length: 705 aa Download sequence

MALPPPSSSR LRGMLQASVQ SVQWTYSLFW QICPQQGILV WSDGYYNGAI KTRKTVQPME  60
VSAEEASLQR SQQLRELYDS LSAGETNQPP ARRPCASLSP EDLTESEWFY LMCVSFSFPP  120
GVGLPGKAYA RRQHVWLTGA NEVDSKTFSR AILAKSARIQ TVVCIPLLGG VVEFGTTERV  180
PEDHAFVQRV KTFFVDHHHP PPPKPALSEH STSNPTTSSD HPHFHSSNLL PAMSTDPPLN  240
AAQEDEEDEE DDNQEEDDEA ESDSEAETGP NGGAVVPAAN PPQALAAVAE PSELMQLEMS  300
EDIRLGSPDD ASNNLDSDFH LLALSQSRNP ADQQRQADSY RAESTRRWPS VQEPLSSGLQ  360
PPHAGPLALE ELTNDDTHYS ETVSTILQGQ STRWTMNSST DYAVCSTQSA FAKWSSRVDH  420
HLLMPAEGTS QWLLKYILFS VPFLHSKYRD ENSPKSHEGE ASTRLRKGTP QDELSANHVL  480
AERRRREKLN ERFIILRSLV PFVTKMDKAS ILGDTIEYVK QLRKKIQDLE ARNVPMEDDQ  540
RSRSSGEIQR SSSCKDLRSG LPVVERTQAG HGSEKRKLRI VEGSGGVAIG KPKAMEDLPP  600
PLPPPPPQPE PSPTPMVTGT SLEVSIIESD GLLELQCPYR EGLLLDVMQT LRELRIETTV  660
VQSSLNNGYF VAELRAKVKD NVSGKKISIT EVKRVINQII PQSDS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	482	487	ERRRRE
2	483	488	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	1e-102	bHLH family protein