PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP035545.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Trihelix

Protein Properties

Length: 181aa MW: 20757.3 Da PI: 5.171

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP035545.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	30.9	7e-10	36	105	7	76
trihelix 7 vlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76 l L++ + +e + ++ + ++W+ +++++ + g++r+ q + kw+ l ++yk ik++e k ++ +s PCP035545.1 36 ELILVNEVAAVEADCLKALSSFQKWKIIAQNCFALGVSRTLDQYRRKWDALFGEYKGIKQWEAKCRASDS 105 55666666777777777888889****************************************9644433 PP

Sequence ? help Back to Top
Protein Sequence Length: 181 aa Download sequence
MKPEQTPSQL DRSHRSSGNR RSTRSQVAPD WNPTDELILV NEVAAVEADC LKALSSFQKW 60 KIIAQNCFAL GVSRTLDQYR RKWDALFGEY KGIKQWEAKC RASDSYWVLG IERRKRNGLP 120 EKFDQELFSG IDKLVRVRGN QSDTDPDSDP EDEAEAEPKE ELDSKPGMLV HKPQMEICVD 180 M

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31270.1	1e-41	Trihelix family protein