PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP034400.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | Trihelix | ||||||||
Protein Properties | Length: 190aa MW: 21812.7 Da PI: 8.0724 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 26 | 2.5e-08 | 16 | 79 | 1 | 59 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...rergf..erspkqCkekwenlnk 59 +W + + aLi+a ++ +l+ g l+++ W+ev++++ + +g+ +++ +qC+++++ l+k PCP034400.1 16 CWNEADTEALITAWGDRYLHLNHGILRQKEWKEVADAVnstQNGGVkpSKTDVQCRNRIDTLKK 79 7*************************************99977777557899********9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence |
MNRRTRTHAP AGREDCWNEA DTEALITAWG DRYLHLNHGI LRQKEWKEVA DAVNSTQNGG 60 VKPSKTDVQC RNRIDTLKKN PYPLEGSRRD DGGDEAAGLS VGAVCRELAR AISRFGEMYE 120 RIENSKRKQM MELEKQRMEF DKELELQRLN MFMDVQVELG KKMKLPTYSH SSGPAIAESF 180 MSSFLVIFDR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11100.1 | 9e-27 | Trihelix family protein |