PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP034210.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 347aa    MW: 37891.3 Da    PI: 6.2897
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP034210.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.81.3e-15165211455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   hn+ E+rRR+riN+++  L+ l+P++      K +Ka++L +++eY+k+Lq
  PCP034210.1 165 VHNMSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEVIEYLKQLQ 211
                  6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MADLYGTAPD SEEISNILSQ LIHGHGSSAS SCMPFKPTYM HSSVPPPIQA ATPSEVLIPE  60
ARHEDHRRFA QLVNQSGTDQ RVARGNSNSA GVLDSSTAFD FYDSGGYFTK EVKEGMESDG  120
RRISSENDLG GYSCDSEKDL EEAADGQLNS APPRSSSKRS RAAEVHNMSE KRRRSRINEK  180
MKALQNLIPN SNKTDKASML DEVIEYLKQL QLQVQMLTMR NGLSLHPMCL PGVMQPMQLP  240
HIFEEGSNKF PKSGKGISPF YGTHENSVLS AFNLSAGCMI SNPPMVLPSV ANVATSEATF  300
GFEPSIQAHY RPFSVPSSSK ELFSDGEPQS KLHTIRTGKS TSSDVDV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.19e-45bHLH family protein