PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP033880.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Protein Properties

Length: 325aa MW: 37344.8 Da PI: 9.5946

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP033880.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	41.8	1.9e-13	17	106	3	99
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 k+ +d ++++ l++pkkf++++g k s + l+ ++g +W v+l r+ +g+ ++ +G +F + L+ g +vF+++g+s+f +v +f++ PCP033880.1 17 KAI-LEDISSNRKLSIPKKFVKKYGDK--LSNPVLLKLPNGSEWPVEL--RRWDGKAWFDNGRPDFSEFYSLRCGHWLVFQYEGNSKF--NVFIFDR 106 443.378888999*********987..66679999*******..88888899************************9999..8888876 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MASVHGKTDN WPPHFFKAIL EDISSNRKLS IPKKFVKKYG DKLSNPVLLK LPNGSEWPVE 60 LRRWDGKAWF DNGRPDFSEF YSLRCGHWLV FQYEGNSKFN VFIFDRSCTE IDYPQAMPQM 120 DSADQDDDSD DDLDDYSTHR GKSTLPCTRP HKKNRTSSSG KDNFPANKRG EGKSNTRRFE 180 KQRPGYVGRM NPLTKNGKAT ALDRAEVFKS QNPSSFHVAM KPTYLRQFXG WLEFVRDNNL 240 VLDDVRAFVL NTNNTKPLFD VVLFRAHDDG EKTVLEIEEG DFLPCPKSEG RSPIAPQSHR 300 KKRTSWSPKA RAGLEFLGAW DKILN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	1e-24	B3 family protein