PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP033788.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ZF-HD
Protein Properties Length: 319aa    MW: 35079.5 Da    PI: 10.0048
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP033788.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer101.27.2e-32110166259
  ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                  +++rY+eClkNhAa+ Ggh++DGCgEfmps g+e t+ alkCaAC+CHRnFHR+e + 
  PCP033788.1 110 SRIRYRECLKNHAANSGGHVLDGCGEFMPS-GDEDTPGALKCAACECHRNFHRKEIDG 166
                  579**************************9.7777*******************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MELRGRDNKV IGRMPSTLTY TPPPHRDSSS SKLSSSPAFS SAGHHGSNTI LFTHPPHQTL  60
DRSRRDPNPN PDLVPSPVVV TPSATATIAS GSNFKAPPAP PPPPPSAAAS RIRYRECLKN  120
HAANSGGHVL DGCGEFMPSG DEDTPGALKC AACECHRNFH RKEIDGEYVS NNYYVINHQQ  180
HNSRRDSALT RLPLLASPAR ALPVYHSTAG GPSQPMMMTF GGGGGVVAES SSEDLNMNNK  240
LFRGANYAEE AQGSKKRFRT KFSQEQKEKM TDVAEKLGWR IQKHDEQEVQ KLCSEVGIKR  300
QVFKVWMHNN KKAMKKKQM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18350.15e-61ZF-HD family protein