PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP033591.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C3H
Protein Properties Length: 415aa    MW: 44902.6 Da    PI: 7.7914
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP033591.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.67.1e-0634461426
                 --TTTTT-SS-SS CS
      zf-CCCH 14 tCkyGdrCkFaHg 26
                  C++GdrCk+ H+
  PCP033591.1 34 SCQFGDRCKYLHV 46
                 7***********7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    
MLTLSLSIST RIEWRHSALL LHVGQPNPIG YTISCQFGDR CKYLHVVQQQ HKSNPFGFGS  60
DQQHKSNLFG FGSDQERKSN PYGFGVQNNS QTKGAADFGP KQSQNKPFEN KWSRFSSATA  120
AAAPSSQKSD KQAQATNHTC TDPKSCRSII VDDFKHERPL WKLTCYGHWK NSPCDIAGDI  180
SYEELRAAAY DDANRGLNLQ SIVERERSLL NTKLLEFENL CKPCTALPNS TLASQNPSPS  240
ASPNGFLQTA QNSVAPSVSS FTQLGTSLNT GFGPRQVSLH XPSAPSNNGF QQLNPFPNSS  300
PTPSGVGTNN FPSGSVVGSQ LPAATHGNGF PSNTGFINTG IIRPQTNPFA TLAVSQIPSA  360
TTGQSPIVGQ STSEVEFVTN MQTEKISGNT SIWLKKIWSP GEIPEEEPPE ALVEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75340.23e-56C3H family protein