PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP033403.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 121aa MW: 14052.9 Da PI: 9.5489 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 113.9 | 1.7e-35 | 6 | 106 | 29 | 129 |
NAM 29 eleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmh 124 + ++++evdi+k+ PwdLp k + ++++ +wyfF+++++ky+tg r++r+t+ gyWkatg+d++vl +ge g ktL+f++grapkge+tdWvmh PCP033403.1 6 PY-NFVAEVDIHKYAPWDLPeKsSWQNGDLKWYFFCPTERKYPTGARAKRTTECGYWKATGNDRSVLY-NGEGAGKIKTLIFHTGRAPKGERTDWVMH 101 55.6799************94345566777**************************************.9999************************* PP NAM 125 eyrle 129 eyrle PCP033403.1 102 EYRLE 106 ***85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 121 aa Download sequence |
MGKRLPYNFV AEVDIHKYAP WDLPEKSSWQ NGDLKWYFFC PTERKYPTGA RAKRTTECGY 60 WKATGNDRSV LYNGEGAGKI KTLIFHTGRA PKGERTDWVM HEYRLESKDL ANRGVPQICY 120 S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64060.1 | 1e-53 | NAC family protein |