PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP033051.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | SBP | ||||||||
Protein Properties | Length: 145aa MW: 16183.1 Da PI: 7.7924 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 75.4 | 9.6e-24 | 87 | 135 | 1 | 49 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSE CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrf 49 +Cqve+C++dls+ak+yhrrhkvC++hska+++lv ++qrfCqqCsr PCP033051.1 87 VCQVEDCKTDLSNAKDYHRRHKVCDMHSKATEALVGSVMQRFCQQCSRL 135 6**********************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 145 aa Download sequence |
MGWPETPSDA GLSNSSSSGS DNISPGNEKD KRELEKRRRD VFVENRELND EAASLNLKLG 60 GQTYPIMEEV QTGKKTKTIG TTSNRAVCQV EDCKTDLSNA KDYHRRHKVC DMHSKATEAL 120 VGSVMQRFCQ QCSRLVPSYC YSLFG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 36 | 77 | KRRRDVFVENRELNDEAASLNLKLGGQTYPIMEEVQTGKKTK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60030.1 | 4e-23 | SBP family protein |