PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP032928.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 323aa    MW: 35890.4 Da    PI: 7.2521
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP032928.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.41.1e-20135184255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                   y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  PCP032928.1 135 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALAYDKAAFKLRG 184
                  59******9.**********955...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MATSIDLYSS STMRSNLSDP LREDQLMKAL MPFMKSASST SPSTSYTYPP QNNQNFNLYP  60
DFFSAPMISQ AGAIGLNQLT PSQILQIQSQ MILQQHQQKQ QISAFASSPA HTLKLLHPKA  120
VPMKQAGTPS KPTKLYRGVR QRHWGKWVAE IRLPRNRTRL WLGTFDTAEE AALAYDKAAF  180
KLRGDFARLN FPHLRHQGAL VCGDFGHYKP LHSSVDAKLQ AICQGLAANS TKQGNTGEPC  240
PVAERKPVVS APLEAKMDDS VKSELKSEWE AFPSSSYSPS PSDESSSPES DITFLDFSDS  300
QWDEAENFGL EKYPSVEIDW SAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.11e-58ERF family protein