PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP032404.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 104aa MW: 11408.9 Da PI: 4.9327 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 36.1 | 1.9e-11 | 46 | 100 | 1 | 48 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLp 48 lp+G++F+Ptd+el+ e+L++kve+k+ ++++ i+ +i++++P++Lp PCP032404.1 46 LPAGVKFDPTDQELI-EHLEAKVEAKDskshplIDEFIPtIEGEdGICYTHPEKLP 100 799************.99*******996665443333333666646*********9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 104 aa Download sequence |
MSKSNLGSIR SSDLIDAKLE EHQMCGSKQC PGCGHKLEGK PDWLGLPAGV KFDPTDQELI 60 EHLEAKVEAK DSKSHPLIDE FIPTIEGEDG ICYTHPEKLP GKNI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29230.1 | 9e-58 | NAC family protein |