PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP032215.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 192aa MW: 22508.9 Da PI: 9.5985 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 90.8 | 6.9e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +ri+n++n qvtfskRrng+ KKA+ELSvLCda+va+ii+ss+gklye++s PCP032215.1 9 ERIKNNINLQVTFSKRRNGLRKKAHELSVLCDAQVALIIYSSRGKLYEFCS 59 69***********************************************96 PP | |||||||
2 | K-box | 83.9 | 3.5e-28 | 76 | 171 | 5 | 100 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 s+ +++++++++ +qe+++Lk + e Lqr+qRhllGedL++L lkeL Le+qL++ l+k ++ K++++++q+eel+kke++l +nk+L+ +l+e PCP032215.1 76 SQDNVADNETQNIYQEVSRLKVKHEALQRSQRHLLGEDLQQLRLKELLVLEKQLDRTLSKAKQEKTRMMFNQLEELRKKENDLAGINKQLKCELQE 171 344499************************************************************************************998875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MGRGRVVMER IKNNINLQVT FSKRRNGLRK KAHELSVLCD AQVALIIYSS RGKLYEFCST 60 DMNKILEQYR QSCYSSQDNV ADNETQNIYQ EVSRLKVKHE ALQRSQRHLL GEDLQQLRLK 120 ELLVLEKQLD RTLSKAKQEK TRMMFNQLEE LRKKENDLAG INKQLKCELQ EVGPSNANYV 180 ACEEPTLRLH IW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45650.1 | 3e-50 | MIKC_MADS family protein |