PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP032008.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | LBD | ||||||||
Protein Properties | Length: 105aa MW: 11875.2 Da PI: 4.6708 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 44.6 | 4e-14 | 1 | 55 | 46 | 100 |
DUF260 46 lkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +++lp + re+a++s++yeA r++dPvyG+v++i++lq+++ ++++e+ +++ + PCP032008.1 1 MQQLPVHLREAAADSMFYEASLRVEDPVYGCVRIISQLQHHILEAQSEILKTNGQ 55 689999*****************************************99887765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 105 aa Download sequence |
MQQLPVHLRE AAADSMFYEA SLRVEDPVYG CVRIISQLQH HILEAQSEIL KTNGQIASYI 60 AQQQLQQQQQ NVVHGASYQQ DMQISEYLGV GSDVQTLAND SYFHP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G26660.1 | 4e-14 | LBD family protein |