PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP031532.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 210aa MW: 23621.8 Da PI: 8.0709 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 90.1 | 1.1e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g++KKAeELSvLCda++a+iifsstgkl+ey+s PCP031532.1 9 KKIDNATARQVTFSKRRRGLFKKAEELSVLCDADIALIIFSSTGKLFEYAS 59 68***********************************************86 PP | |||||||
2 | K-box | 41.6 | 5.2e-15 | 91 | 160 | 18 | 87 |
K-box 18 qqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekel 87 + ++++L kei +++R++ Ge+++ Lsl+eLq+Le+ Le +l + +kK+e ++++i++lq+ e PCP031532.1 91 NSNYSRLSKEIAAKSHQLRQMRGEEIQGLSLEELQRLEKSLEAGLGGVVEKKSEKIMKEINDLQRNVVEK 160 567999**********************************************************987665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MAREKIQIKK IDNATARQVT FSKRRRGLFK KAEELSVLCD ADIALIIFSS TGKLFEYASS 60 SMKEILERHN LHSKNLDKLE QPSLELQLVE NSNYSRLSKE IAAKSHQLRQ MRGEEIQGLS 120 LEELQRLEKS LEAGLGGVVE KKSEKIMKEI NDLQRNVVEK SNGRRLVHVD SENLITEEGQ 180 SSESVTNLCK SNSGPQDYDS SVTSLKLGCA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 3e-98 | MIKC_MADS family protein |