PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP031377.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 849aa MW: 95088.2 Da PI: 4.8101

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP031377.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.1	3e-52	9	144	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 lp GfrF+Ptdeel++++L+ k++g++ e+ +vi+e+d++++ePwdLpk +k++++ew+fF++rd+ky++g+r+nrat++gyWkatgkd++++s+ PCP031377.1 9 LPLGFRFRPTDEELINHFLRLKINGRDSEV-QVIPEIDVCRWEPWDLPKlsVIKSDDQEWFFFCPRDRKYPNGHRSNRATDAGYWKATGKDRTIKSRq 105 699**********************999.99***********5458889999**********************************98 PP NAM 96 ......kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +vg+kktLvfy+grapkge+t+W+mheyr+ PCP031377.1 106 ckfatnSNGQVGMKKTLVFYRGRAPKGERTSWIMHEYRA 144 8888877778*************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 849 aa Download sequence
MAELSTESLP LGFRFRPTDE ELINHFLRLK INGRDSEVQV IPEIDVCRWE PWDLPKLSVI 60 KSDDQEWFFF CPRDRKYPNG HRSNRATDAG YWKATGKDRT IKSRQCKFAT NSNGQVGMKK 120 TLVFYRGRAP KGERTSWIMH EYRATQKELD GTAPGQGAFV LCRLFHKPEE KADEPKYEEV 180 EQTGLSPTTT KSPPDESSDI VQETATSEMQ GEKQSEGIMR WLTDKSDKVT PDAFCQLPVN 240 SFMASDMEDH GAVETGIQGH LTMEENPAFY ESLGGPVDCK VFSLSHLQIN AELEHYVGSP 300 FTSDFGNYDN VLHFRDGTCE RDVSLKELFD EFSNSHYESS YEESTSQKNL VVGNETYLSG 360 HACTTPPGNS CFNGVWGNTD AKIAQNDLQR RASGLYNEQF GSEVLQNTSF GYWQAKAQAS 420 FDDRKPRMGN MTDIYLSQCS FAEQFPVNSV NDVSNSLDGS TSWKNLDNHS GDDVGGTGIK 480 IRDRHPQLQP NIDNFVDQGS AARRLHLLVD RSVGSITNGN ESDENYSREE DEVQSIITET 540 REDIQQSPTS DEQEEEHAIF SNKEEWSSTN NSINHGFDPD GRSRIKIRPH QPQQQPNSDS 600 SVTQDTAHRR IRLQMTISSG PVANSNVRET DYGGEDEVES ANTEAREAIQ QSLTSDEHEK 660 EHAEINDKED LATMKNSVNY DSNVVGRSGI KMKAPKPQQP LSSGDSATQA PGSRRIRLQM 720 STSPRSVVDS NVRATTPAEE DNVQSTIYEV KEATKRISNF DEQEAESRLL KSDMGRKISD 780 GSPTELVDEK RAAEEAPRKL RLRTGRDGAS PSSHMGLSVS SKELPKHHGP SPTFVILVGR 840 GKEDTEEQL

Sequence ? help Back to Top

Protein Sequence Length: 849 aa Download sequence

MAELSTESLP LGFRFRPTDE ELINHFLRLK INGRDSEVQV IPEIDVCRWE PWDLPKLSVI  60
KSDDQEWFFF CPRDRKYPNG HRSNRATDAG YWKATGKDRT IKSRQCKFAT NSNGQVGMKK  120
TLVFYRGRAP KGERTSWIMH EYRATQKELD GTAPGQGAFV LCRLFHKPEE KADEPKYEEV  180
EQTGLSPTTT KSPPDESSDI VQETATSEMQ GEKQSEGIMR WLTDKSDKVT PDAFCQLPVN  240
SFMASDMEDH GAVETGIQGH LTMEENPAFY ESLGGPVDCK VFSLSHLQIN AELEHYVGSP  300
FTSDFGNYDN VLHFRDGTCE RDVSLKELFD EFSNSHYESS YEESTSQKNL VVGNETYLSG  360
HACTTPPGNS CFNGVWGNTD AKIAQNDLQR RASGLYNEQF GSEVLQNTSF GYWQAKAQAS  420
FDDRKPRMGN MTDIYLSQCS FAEQFPVNSV NDVSNSLDGS TSWKNLDNHS GDDVGGTGIK  480
IRDRHPQLQP NIDNFVDQGS AARRLHLLVD RSVGSITNGN ESDENYSREE DEVQSIITET  540
REDIQQSPTS DEQEEEHAIF SNKEEWSSTN NSINHGFDPD GRSRIKIRPH QPQQQPNSDS  600
SVTQDTAHRR IRLQMTISSG PVANSNVRET DYGGEDEVES ANTEAREAIQ QSLTSDEHEK  660
EHAEINDKED LATMKNSVNY DSNVVGRSGI KMKAPKPQQP LSSGDSATQA PGSRRIRLQM  720
STSPRSVVDS NVRATTPAEE DNVQSTIYEV KEATKRISNF DEQEAESRLL KSDMGRKISD  780
GSPTELVDEK RAAEEAPRKL RLRTGRDGAS PSSHMGLSVS SKELPKHHGP SPTFVILVGR  840
GKEDTEEQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33060.1	1e-128	NAC family protein