PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP031234.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 654aa    MW: 70507 Da    PI: 5.7943
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP031234.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.15.9e-52351621128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                  l+pGfrFhPtdeelv +yLk+kv +k++++ ++i+evdiyk+ePwdL  k ++k++++e+yfFs  d+ky +g r nrat++gyWkatg+d++v++ +
  PCP031234.1  35 LAPGFRFHPTDEELVIYYLKRKVCRKPFKF-NAISEVDIYKSEPWDLAdKsSLKSRDQEYYFFSALDRKYGNGARMNRATNQGYWKATGNDRAVKH-N 130
                  579**************************9.89**************75347888999**************************************.9 PP

          NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                  + +vg+kktLvf++grap+g++t+Wvmheyrl
  PCP031234.1 131 DIVVGMKKTLVFHSGRAPDGKRTNWVMHEYRL 162
                  99****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 654 aa     Download sequence    
MGREADLQII ASAAADVAVA APLVPPTLPP APTALAPGFR FHPTDEELVI YYLKRKVCRK  60
PFKFNAISEV DIYKSEPWDL ADKSSLKSRD QEYYFFSALD RKYGNGARMN RATNQGYWKA  120
TGNDRAVKHN DIVVGMKKTL VFHSGRAPDG KRTNWVMHEY RLVDEVFEKA GLGAIQDAFV  180
LCRVFHKSNI GPPNGHRYAP FVEEEWDDDD KLTLVPGQET RSVAVVSRDA FVVGNGHAAC  240
SEQNDYADGS EQKVHAARSE QNGLAAYIRG NGHAAYTGGN GHAAHTGGNG HAVCIGGNGQ  300
AAYNGENGRG TSVEGNGLGT SMEGIAHGTS VEGTGHGTSV KGSGRSTSVE GGGRGTSIER  360
NGHGTSVEGS GHHTSVEGSG HHTSVEENGH GISVEGNIVE GIGHGAIIVV DDNGTINEGE  420
CHETCTAGNG HSVPSAENNI EQDTQAISKA IVVVPELPAE NQTVLPPCKT EKTDDYPMTC  480
VVNREERLDD FPSPGPDDAQ PLLTLFNRQP GQLRQYKRRR HNDSNSNHSN ASEISSGMTH  540
DPCSSTTTTA STEASMTTTR NFLSALVEYQ LLESLEPKDT TPAPPPELNA ALMESSVPTS  600
CLKYIETLQT EIHKISIERE TLKFEMMSAQ AMINILQARI DLLNKENEDL KKKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10490.12e-94NAC family protein