PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP031198.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 182aa MW: 20727.7 Da PI: 10.1569 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 99.7 | 1.2e-31 | 25 | 74 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs++g+lyey+ PCP031198.1 25 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYA 74 79***********************************************8 PP | |||||||
2 | K-box | 72.5 | 1.3e-24 | 121 | 177 | 13 | 69 |
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 ++ ++qqe+akL+++i +Lq+ +R+++G+ L+s+s+k+L++Le++Lek++++iRskK PCP031198.1 121 TSYYYQQEAAKLRAQIVKLQNDNRNMMGDALSSMSVKDLKSLENKLEKGISRIRSKK 177 56799***************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence |
MAYESKSLSM DSPQRKLGRG KIEIKRIENT TNRQVTFCKR RNGLLKKAYE LSVLCDAEVA 60 LIVFSNRGRL YEYANNSVKG TIERYKKACA DSSNTGSVSE ASTQGTMKYE VLNYSDIDFK 120 TSYYYQQEAA KLRAQIVKLQ NDNRNMMGDA LSSMSVKDLK SLENKLEKGI SRIRSKKLLH 180 SH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18960.1 | 3e-79 | MIKC_MADS family protein |