PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP031141.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 351aa MW: 39830.1 Da PI: 4.5238

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP031141.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	180.6	3.9e-56	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 lppGfrFhPtdeelv +yL +k++g+++el e+i+evd+yk+ePwdLp k + +++ ewyf+s+rd+ky++g+r+nrat++gyWkatgkd++v s + PCP031141.1 6 LPPGFRFHPTDEELVAYYLDRKINGRTIEL-EIIPEVDLYKCEPWDLPdKsFLPSKDMEWYFYSPRDRKYPNGSRTNRATRAGYWKATGKDRAVNS-Q 101 79**************************.99**********96435566888**********************************.8 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 +++vg+kktLv+y+grap+g +t+Wvmheyrl PCP031141.1 102 RRAVGMKKTLVYYRGRAPHGIRTNWVMHEYRL 133 999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MAPMSLPPGF RFHPTDEELV AYYLDRKING RTIELEIIPE VDLYKCEPWD LPDKSFLPSK 60 DMEWYFYSPR DRKYPNGSRT NRATRAGYWK ATGKDRAVNS QRRAVGMKKT LVYYRGRAPH 120 GIRTNWVMHE YRLVNSVCGN ASSSLKDSYA LCRVFKKTIQ MPKSNKEYTP IGINNADNDS 180 IWVSNEQLLG EDTSGINEGA SRGIETDQDE NYSNHDYPKF LSDTSSSDLT QGTPTETGIA 240 DDLQAPFASD EANSSADLYP FGVHCSSDLL QETYIPPNAS SLNTYQFPYP PLELEDFPQI 300 NLAAETNTAK PEIIDEYMSY DKFKDYMNGT FEEIFSLCSS QDNSVPLSLQ D

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MAPMSLPPGF RFHPTDEELV AYYLDRKING RTIELEIIPE VDLYKCEPWD LPDKSFLPSK  60
DMEWYFYSPR DRKYPNGSRT NRATRAGYWK ATGKDRAVNS QRRAVGMKKT LVYYRGRAPH  120
GIRTNWVMHE YRLVNSVCGN ASSSLKDSYA LCRVFKKTIQ MPKSNKEYTP IGINNADNDS  180
IWVSNEQLLG EDTSGINEGA SRGIETDQDE NYSNHDYPKF LSDTSSSDLT QGTPTETGIA  240
DDLQAPFASD EANSSADLYP FGVHCSSDLL QETYIPPNAS SLNTYQFPYP PLELEDFPQI  300
NLAAETNTAK PEIIDEYMSY DKFKDYMNGT FEEIFSLCSS QDNSVPLSLQ D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G54330.1	1e-108	NAC family protein