PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP030961.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 192aa MW: 21867.2 Da PI: 5.6579 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 61.9 | 2e-19 | 7 | 54 | 1 | 49 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49 +ppGfrFhPtdeelv++yL+kkv++++++l +vik+vd+yk+ePwdL+ PCP030961.1 7 VPPGFRFHPTDEELVDYYLRKKVTSRRIDL-DVIKDVDLYKIEPWDLQD 54 69****************************.9***************83 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
METFSHVPPG FRFHPTDEEL VDYYLRKKVT SRRIDLDVIK DVDLYKIEPW DLQDLDSPGH 60 NSSSMNMNMV PYHHLPSYPC KKELDHLPFQ VPHEHFFQLP LLGSPKLLQS SSATAVSSSN 120 SMAPHAYGID INHACTFQPS DQDQNFHGVV YGNSSNDDHQ RTVDQMTDWR ALDKFVASQL 180 SQDDASKGNS YS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12260.1 | 1e-30 | NAC family protein |