PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP030720.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 393aa MW: 44809.5 Da PI: 7.1201

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP030720.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.6	5.1e-53	9	138	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 +ppGfrFhPtdeel+++yLkkkv+ +k+++ evi+evd++++ePw+L++ ++ + ++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk + + PCP030720.1 9 VPPGFRFHPTDEELLHYYLKKKVSFQKFDM-EVIREVDLNQMEPWELQErcRIGStPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRN- 104 69**************************.99**********963433332556*********************************9. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 + +++g++ktLvfy+grap+g+ktdW+mheyrle PCP030720.1 105 TFKKIGMRKTLVFYRGRAPHGQKTDWIMHEYRLE 138 8899**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MANSSSGGVP PGFRFHPTDE ELLHYYLKKK VSFQKFDMEV IREVDLNQME PWELQERCRI 60 GSTPQNEWYF FSHKDRKYPT GSRTNRATNA GFWKATGRDK CIRNTFKKIG MRKTLVFYRG 120 RAPHGQKTDW IMHEYRLEDG DDPQGNLFSE DGWVICRVFK KKNLFKVANE GGSSSMNSSE 180 HQQLNNASSN SQLQARSFMH SHRDNQYLLR QQHHAATQEL SNNSSLHYAH LQPPPHYSLF 240 QYQALIPTLA HKPHSSYDDY SSQLPSDDSP AHGMVKQLMT NPRDCESGSE GLRYQPCEPG 300 LEVGTCEPDH QPNMVAEGAG TAGGRDNNHD HQGMSEWAML DRLVTSHDLG NDKDSSSKGT 360 ARYEDANAPS SVNQINHQHL SLRGEMDFWG YAK

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MANSSSGGVP PGFRFHPTDE ELLHYYLKKK VSFQKFDMEV IREVDLNQME PWELQERCRI  60
GSTPQNEWYF FSHKDRKYPT GSRTNRATNA GFWKATGRDK CIRNTFKKIG MRKTLVFYRG  120
RAPHGQKTDW IMHEYRLEDG DDPQGNLFSE DGWVICRVFK KKNLFKVANE GGSSSMNSSE  180
HQQLNNASSN SQLQARSFMH SHRDNQYLLR QQHHAATQEL SNNSSLHYAH LQPPPHYSLF  240
QYQALIPTLA HKPHSSYDDY SSQLPSDDSP AHGMVKQLMT NPRDCESGSE GLRYQPCEPG  300
LEVGTCEPDH QPNMVAEGAG TAGGRDNNHD HQGMSEWAML DRLVTSHDLG NDKDSSSKGT  360
ARYEDANAPS SVNQINHQHL SLRGEMDFWG YAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G10350.1	1e-149	NAC family protein