PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP030669.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 824aa MW: 89515.1 Da PI: 6.3018 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 66.6 | 3.2e-21 | 119 | 174 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +++t++q++eLe+lF+++++p++++r eL+++l+L++rqVk+WFqNrR+++k PCP030669.1 119 KKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLNLETRQVKFWFQNRRTQMK 174 688999***********************************************999 PP | |||||||
2 | START | 208.8 | 2.1e-65 | 326 | 549 | 1 | 205 |
HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEE CS START 1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevi 85 ela++a++elvk+a+ +ep+W +s e +n +e++++f++ + + +ea+r+sg+v+ ++ +lve+l+d++ +W e+++ + +t++vi PCP030669.1 326 ELALAAMDELVKMAQTDEPLWLRSLeggrEVLNHEEYMRSFTPCIGlkpngFVSEASRESGMVIINSLTLVETLMDSN-RWLEMFPgviaRTSTTDVI 422 5899************************99***********999989***9***************************.******************* PP CTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSX CS START 86 ssg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrl 176 ssg galqlm aelq+lsplvp R++ f+R+++q+ +g+w++vdvSvd+ ++ ++ + ++ +++lpSg+++++++ng+s+vtwveh+++++++ PCP030669.1 423 SSGmggtrnGALQLMHAELQVLSPLVPvREVNFLRFCKQHAEGVWAVVDVSVDVIRDTSSAPTFMNCRRLPSGCVVQDMPNGYSRVTWVEHAEYDESQ 520 **********************************************************99************************************** PP XHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS START 177 phwllrslvksglaegaktwvatlqrqce 205 +h+l+r+l++sg+ +ga++wvatlqrq e PCP030669.1 521 VHQLYRPLLSSGMGFGAQRWVATLQRQSE 549 **************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 824 aa Download sequence |
MSFGGFLDNS TGSCGGTRIV ADIPYTNSNN NMPSSAIAQP NLVTQSFTKS MFNSPGLSLA 60 LQTNVDGQGD VTRVAESYEA NNGGRRSREE EHESRSGSDN MDGASGDDQD AADNNPRKKK 120 RYHRHTPQQI QELEALFKEC PHPDEKQRLE LSRRLNLETR QVKFWFQNRR TQMKTQLERH 180 ENSLLRQEND KLRAENMSIR DAMRNPICSN CGGPAIIGDI SLDEQHLRIE NARLKDELDR 240 VCALAGKFLG RPISSLATSM GPPLPSSTLE LGVGSNGFGG MSNVATSISM GPDFGGGIGS 300 AMSIVSHGRP SVTGLDRSIE RSMFLELALA AMDELVKMAQ TDEPLWLRSL EGGREVLNHE 360 EYMRSFTPCI GLKPNGFVSE ASRESGMVII NSLTLVETLM DSNRWLEMFP GVIARTSTTD 420 VISSGMGGTR NGALQLMHAE LQVLSPLVPV REVNFLRFCK QHAEGVWAVV DVSVDVIRDT 480 SSAPTFMNCR RLPSGCVVQD MPNGYSRVTW VEHAEYDESQ VHQLYRPLLS SGMGFGAQRW 540 VATLQRQSEC QAILMSSSVP SRDHTAITTS GRRSMLKLAQ RMTDNFCAGV CASTVHKWTK 600 LNAGNVDEDV RVMTRESLDD PGEPPGVVLS AATSVWLPVS PQRLFDFLRD ERLRSEWDIL 660 SNGGPMQEMA HIAKGQDPGN CVSLLRARAN ANQGSMLILQ ETRIDAAGSL VVYAPVDIPA 720 MHVVMNGGDS AYVALLPSGF AIVPDGPGSR GPMSGKGTTH GSSNGGGCGD GGGNRVSGSL 780 LTMTFQILVN SLPAGKLTVE SVETVNHLIS CTVQKIKASL HCES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61150.1 | 0.0 | HD-ZIP family protein |