PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP030654.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 352aa    MW: 38835 Da    PI: 8.0704
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP030654.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.92.8e-11174220455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   h ++Er+RR+++ ++f  L  ++P +     kK++Ka++L  A++++k+Lq
  PCP030654.1 174 DHIMAERKRREKLSQRFIALSAIVPGL-----KKMDKASVLGDAIKHVKELQ 220
                  699************************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MDYSFIPQCH LNSLDEGFNA HDIGTALGEN FKQSFSSESY SSYSNLTTKN ATTTTTIASS  60
GGSSINETSH GTSFERPAKL LKTSSWNSSI TENVSPKPCS SSSQFLSFEN LNSPLPSKPQ  120
KFCNKFKPAL KPKDEAPSQI NLQFSHAQDD EAKGRSQGTK RPCPTSRIPS HAQDHIMAER  180
KRREKLSQRF IALSAIVPGL KKMDKASVLG DAIKHVKELQ ERVKVLEERS KKRTVESVVF  240
VKKSQLSADD DTSSCDENFD GCGPDEAALP EIEARVSEKD VLIRIHCEKQ KGVVVKILSE  300
IEKLQLSVVN SSVLPFGAST LDITIMSQMD DGFDMTVKDL ARKLRVALLP FM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1179184ERKRRE
2180185RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-75bHLH family protein