PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP030616.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

CPP

Protein Properties

Length: 792aa MW: 86651.5 Da PI: 5.3526

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP030616.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	49.7	7.3e-16	499	537	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+CnCkkskClk+YCeCfaag++C e C+C++C+Nk PCP030616.1 499 SCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQECFNKP 537 689**********************************96 PP
2	TCR	50.8	3.2e-16	584	623	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN+ PCP030616.1 584 RHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNTF 623 589***********************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 792 aa Download sequence
MDTPERNQIG TPKAKFEDSP VFNYINSLSP IKPVKSVHIT QTFSSLSFAS LPSVFTSPHV 60 SSHKESRFLR RHNPSDPSKP ESSLESGNKV SANEDAAELC INSAELHEDC VPGDSIGEAS 120 VEPSSEHSKF VIELPRNLKY DCGSPECGAT TRGTEAGCES EAADLSAPLV PYVQKTSENG 180 SSDDGAHLQN ICQSEQRNEL TGSDWESLIS DASDLLIFNS PNGSEAFRGI MQNPLDSVTG 240 FCNSLMPRLS QNEINDEQNV LVLDTVVSRE QPETEDPSSQ YGEASQPEDT ELMQDHLNNC 300 MVSSQIEKEN NKVEAPMQFN CKPGLNLHRG LRRRCLDFEM VGVRRKSLDN VPNSSSSMLS 360 QSDEKITTND KQLVPMKPGG ESVRCILPGI GLHLNALATT SKDYKTIKRE NMAYGRQLSL 420 PNLTAPANSP TAGQGPGHDS FSSASSERDM DGTENGVQLL QDASQEPAFL ANEEFNQNSP 480 KKKRHVLPKF EQAGEAESSC KRCNCKKSKC LKLYCECFAA GVYCIEPCSC QECFNKPIHE 540 DTVLATRKQI ESRNPLAFAP KVIRNADPVP EYGEESSKTP ASARHKRGCN CKKSSCLKKY 600 CECYQGGVGC SISCRCEGCK NTFGRKDGSF MGTETEADEE EAEACGKSAA ENYQQKNEIQ 660 ENEEQRQDSA LPTTPLRLSR QLVSLPFSSK NKPPRSSVFS IGSSSGLYTS QKLGILRPET 720 KFERHIQTVP EDEMPEILQG DGSPSTGIKT ASPNGKRVCP PNREFAPSPG PRAGRKLILQ 780 SIPSFPSLTP QN

Sequence ? help Back to Top

Protein Sequence Length: 792 aa Download sequence

MDTPERNQIG TPKAKFEDSP VFNYINSLSP IKPVKSVHIT QTFSSLSFAS LPSVFTSPHV  60
SSHKESRFLR RHNPSDPSKP ESSLESGNKV SANEDAAELC INSAELHEDC VPGDSIGEAS  120
VEPSSEHSKF VIELPRNLKY DCGSPECGAT TRGTEAGCES EAADLSAPLV PYVQKTSENG  180
SSDDGAHLQN ICQSEQRNEL TGSDWESLIS DASDLLIFNS PNGSEAFRGI MQNPLDSVTG  240
FCNSLMPRLS QNEINDEQNV LVLDTVVSRE QPETEDPSSQ YGEASQPEDT ELMQDHLNNC  300
MVSSQIEKEN NKVEAPMQFN CKPGLNLHRG LRRRCLDFEM VGVRRKSLDN VPNSSSSMLS  360
QSDEKITTND KQLVPMKPGG ESVRCILPGI GLHLNALATT SKDYKTIKRE NMAYGRQLSL  420
PNLTAPANSP TAGQGPGHDS FSSASSERDM DGTENGVQLL QDASQEPAFL ANEEFNQNSP  480
KKKRHVLPKF EQAGEAESSC KRCNCKKSKC LKLYCECFAA GVYCIEPCSC QECFNKPIHE  540
DTVLATRKQI ESRNPLAFAP KVIRNADPVP EYGEESSKTP ASARHKRGCN CKKSSCLKKY  600
CECYQGGVGC SISCRCEGCK NTFGRKDGSF MGTETEADEE EAEACGKSAA ENYQQKNEIQ  660
ENEEQRQDSA LPTTPLRLSR QLVSLPFSSK NKPPRSSVFS IGSSSGLYTS QKLGILRPET  720
KFERHIQTVP EDEMPEILQG DGSPSTGIKT ASPNGKRVCP PNREFAPSPG PRAGRKLILQ  780
SIPSFPSLTP QN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	481	509	KKKRHVLPKFEQAGEAESSCKRCNCKKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-156	CPP family protein