PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP030603.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TCP

Protein Properties

Length: 554aa MW: 61562.1 Da PI: 7.1254

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP030603.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	105.5	8.6e-33	166	265	1	66
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt................................. 65 a+g+kdrhsk++T++g+RdRRvRl a++a++f+d+qd+LG+d++sk+++WL+++ak+ai+el ++ PCP030603.1 166 ATGRKDRHSKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELDELpswnlysnsttasvpgvethnptttgihcfagv 263 589**************************************************************777777655555444444444444444444433 PP TCP 66 .s 66 PCP030603.1 264 dA 265 31 PP

Sequence ? help Back to Top
Protein Sequence Length: 554 aa Download sequence
MELKTLHDRG FWESQKQEKQ KQLQGSEERN HHHYLHQNPI LNFNHLVQGE EETQQQTQQN 60 HHQAFNFPYF QQDLQTQHQH QHFFGETQQL QLQEQQQAPK KRSFTSSSSL TLGQQSIEYA 120 RSKMGDSHHH QATTSSRLGI RPPSSGGGVV STDIVEVVRG SHIVRATGRK DRHSKVCTAK 180 GPRDRRVRLA AHTAIQFYDV QDRLGYDRPS KAVDWLIKKA KAAIDELDEL PSWNLYSNST 240 TASVPGVETH NPTTTGIHCF AGVDAIGSAN RRTTMVGSGV SEQQIVQNPN SNLTFLPPSL 300 DSDAIADTIK SFFPTGASAI AAAAEAPSST IQFHQNYPPD LLSRTSSQSQ DLRLSLQSFQ 360 DPILLHQHHA HTNQNEQSLF SGSQNPLGFD GSSAAWAEHH HNQQQQEMNR FQRMVAWNSG 420 DGDSGGNGGG SSSSGGFTFN SLLPTQQSST SSLQQQQPSL FGQSQFFFQR GPLQSSNSPS 480 IRAWMMDQQN QRSISHDHHH QISQSIHHQP SFSSMGFTSG GEFSGFHIPA RIHGEEEHDG 540 ISDKPSSASS NSRH

Sequence ? help Back to Top

Protein Sequence Length: 554 aa Download sequence

MELKTLHDRG FWESQKQEKQ KQLQGSEERN HHHYLHQNPI LNFNHLVQGE EETQQQTQQN  60
HHQAFNFPYF QQDLQTQHQH QHFFGETQQL QLQEQQQAPK KRSFTSSSSL TLGQQSIEYA  120
RSKMGDSHHH QATTSSRLGI RPPSSGGGVV STDIVEVVRG SHIVRATGRK DRHSKVCTAK  180
GPRDRRVRLA AHTAIQFYDV QDRLGYDRPS KAVDWLIKKA KAAIDELDEL PSWNLYSNST  240
TASVPGVETH NPTTTGIHCF AGVDAIGSAN RRTTMVGSGV SEQQIVQNPN SNLTFLPPSL  300
DSDAIADTIK SFFPTGASAI AAAAEAPSST IQFHQNYPPD LLSRTSSQSQ DLRLSLQSFQ  360
DPILLHQHHA HTNQNEQSLF SGSQNPLGFD GSSAAWAEHH HNQQQQEMNR FQRMVAWNSG  420
DGDSGGNGGG SSSSGGFTFN SLLPTQQSST SSLQQQQPSL FGQSQFFFQR GPLQSSNSPS  480
IRAWMMDQQN QRSISHDHHH QISQSIHHQP SFSSMGFTSG GEFSGFHIPA RIHGEEEHDG  540
ISDKPSSASS NSRH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	2e-72	TCP family protein