PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP030353.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family HB-other
Protein Properties Length: 361aa    MW: 40974.4 Da    PI: 4.249
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP030353.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.11.7e-09295342653
                  S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
     Homeobox   6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                  +++k q+e+Le++++k++ p+ ++   + + ++L+ ++V  WF  +R 
  PCP030353.1 295 RLKKAQVETLESVYRKTKRPTNAMVSSIVHVTNLPRKRVVKWFEDKRS 342
                  67899****************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MAFASALNTP KGLHFLPLPS SFRERPPTNL VLPRHFPTRF SSTLALARRR NHRAEVAPSK  60
TKMKKKSLGK KEVKEAEVEE EDVDEDAIDA LFRLLEEDLK NDDASFDEED LTEEELSKLE  120
QEVAEALGID GDDDVDDDDD DDDDEEEDDD DDDFVVESYA EEEEEEDDDD DDDEDEEEEE  180
EESPVKLKTW QLRRLAAALK VGRRKTSIKT LAAELCLDRA VVLELLREPP PSLLMMCAAL  240
PDEPATVISV SQTKSVEAVM ETTRETETAT DSVKLEPAVK VPVHVRQQKF SAQKRLKKAQ  300
VETLESVYRK TKRPTNAMVS SIVHVTNLPR KRVVKWFEDK RSEEGVPDSR VPYQRPAPNT  360
V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.14e-58HB-other family protein