PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP030132.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Dof

Protein Properties

Length: 314aa MW: 34367.9 Da PI: 9.5634

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP030132.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123	1e-38	40	101	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 ke+al+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lr +PvGgg+rknk+sss PCP030132.1 40 KEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRSIPVGGGSRKNKRSSS 101 7899******************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MDTAQWPQGI VVKPIEEIVT NSCPKPAAAN NLERKARPQK EQALNCPRCN STNTKFCYYN 60 NYSLTQPRYF CKTCRRYWTE GGSLRSIPVG GGSRKNKRSS SSNNSPSTTS NNSSSSSASK 120 RLPDLIHQNP KINQAQDLNL TFPSTNQDFR NIISGHLLNH HHQQLPNNNI NDQSTNKQQN 180 HISTSSPTST TTTTTTSHLS ALELLTGLTS RGLNSFMPMP VLSDPNNNNS VYNSPSGLIN 240 PMQDFKPTLN FSLDGLGSGY GSLQGHHVQQ SSGRLLFPFE DLKQAPSGGG INEPNKQHGD 300 STGYWTGMLG GGSW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24060.1	1e-48	Dof family protein