PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP029776.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 480aa MW: 53294.2 Da PI: 6.9922

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP029776.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.4	2.8e-32	335	390	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+ eLH+rFv+a++qLGG+++AtPk+i+elm+v+gLt+++vkSHLQkYRl+ PCP029776.1 335 KQRRCWSAELHRRFVDALQQLGGTQVATPKQIRELMQVEGLTNDEVKSHLQKYRLH 390 79****************************************************97 PP
2	Myb_DNA-binding	47.1	5.4e-15	337	388	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++vda +qlGg t+k I + m+ +g+t ++ks++qky+ PCP029776.1 337 RRCWSAELHRRFVDALQQLGGTqvaTPKQIRELMQvEGLTNDEVKSHLQKYR 388 568************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MDLLSLDSSP LFVPKTITDF LAQLSAIKDG SQRSSELDGY VKRLEHELRK IEVFKRELPL 60 CMLLLKDVIE RLKEEGMRWR RMEERPVMAE FIPLKGNSEE DGGALFAIKD GSQRSSELDG 120 YVKRLEDELR KIEVFKRELP LCMLLLKDVI ERLKEEGMRW RRMEERPVMA EFIPLKCNSE 180 EDGGAVSGKE NIDKKNWMSS AQLWSTSINV FDYTKHDSEL KLGNEEDDRS AAENAIELSN 240 KKGVGGALLA FKGQNELSGF ANPCLKGDKE VAVVPNLCLM TPLMSETLAG SANANSKTNH 300 GCRGGGSGSG MAGQLKLQNK PQQQPQQQQQ QPLRKQRRCW SAELHRRFVD ALQQLGGTQV 360 ATPKQIRELM QVEGLTNDEV KSHLQKYRLH IRKLPPSSAA GQGNDLLVPL DHSGEHAKAN 420 NVQSGSPQGP LLAGGFGKGR STTGGKSGDS REGEEDEKSD GQSWTSGNHN HHHHQGAGDV

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MDLLSLDSSP LFVPKTITDF LAQLSAIKDG SQRSSELDGY VKRLEHELRK IEVFKRELPL  60
CMLLLKDVIE RLKEEGMRWR RMEERPVMAE FIPLKGNSEE DGGALFAIKD GSQRSSELDG  120
YVKRLEDELR KIEVFKRELP LCMLLLKDVI ERLKEEGMRW RRMEERPVMA EFIPLKCNSE  180
EDGGAVSGKE NIDKKNWMSS AQLWSTSINV FDYTKHDSEL KLGNEEDDRS AAENAIELSN  240
KKGVGGALLA FKGQNELSGF ANPCLKGDKE VAVVPNLCLM TPLMSETLAG SANANSKTNH  300
GCRGGGSGSG MAGQLKLQNK PQQQPQQQQQ QPLRKQRRCW SAELHRRFVD ALQQLGGTQV  360
ATPKQIRELM QVEGLTNDEV KSHLQKYRLH IRKLPPSSAA GQGNDLLVPL DHSGEHAKAN  420
NVQSGSPQGP LLAGGFGKGR STTGGKSGDS REGEEDEKSD GQSWTSGNHN HHHHQGAGDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37180.1	2e-48	G2-like family protein