PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP029730.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 136aa    MW: 15398.8 Da    PI: 11.1788
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP029730.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.75e-094283854
                 HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 + r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  PCP029730.1 42 AARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 83
                 5699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    
MAAMREMIFR IAAMQPINID PESVKPPKRR NVKISKDPQS VAARHRRERI SERIRILQRL  60
VPGGTKMDTA SMLDEAIHYV KFLKTQVQTL ERAATNRPTG IGFHVAMSSG SYISNSMSKA  120
YQAPHHHQNV HHFGDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.14e-42bHLH family protein