PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP029483.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GATA
Protein Properties Length: 294aa    MW: 31458.1 Da    PI: 5.4215
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP029483.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.65.3e-16201237135
         GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                  C++Cg ++  Tp++Rrgp g++tLCnaCGl+++ kg+
  PCP029483.1 201 CTHCGISSksTPMMRRGPAGPRTLCNACGLKWANKGS 237
                  *****99999************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MAESEHQNSI YSSTGGVTQS NQVDDQDDDV EEPIDNPNIR FEDSTAIPPN QLYLPSSEYP  60
PPAAANGASD QLTLSFHGEV YVFDAVSPDK VQAVLLLLGG YEIPSGIPSM GPVPLNQQGM  120
NDLPARPTQP QRAASLSRFR EKRKERCFDK KIRYTVRKEV ALRMQRKKGQ FTSSKGSSDD  180
GGPVSSTQGS GQDESMQETS CTHCGISSKS TPMMRRGPAG PRTLCNACGL KWANKGSLTG  240
VPKVLNVGIQ DPSLKGIEQI DGGVQDSDVV AMGANIAPSS ANGNNSAMTV DRKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.25e-77GATA family protein