PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP029483.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | GATA | ||||||||
Protein Properties | Length: 294aa MW: 31458.1 Da PI: 5.4215 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 49.6 | 5.3e-16 | 201 | 237 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg ++ Tp++Rrgp g++tLCnaCGl+++ kg+ PCP029483.1 201 CTHCGISSksTPMMRRGPAGPRTLCNACGLKWANKGS 237 *****99999************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 294 aa Download sequence |
MAESEHQNSI YSSTGGVTQS NQVDDQDDDV EEPIDNPNIR FEDSTAIPPN QLYLPSSEYP 60 PPAAANGASD QLTLSFHGEV YVFDAVSPDK VQAVLLLLGG YEIPSGIPSM GPVPLNQQGM 120 NDLPARPTQP QRAASLSRFR EKRKERCFDK KIRYTVRKEV ALRMQRKKGQ FTSSKGSSDD 180 GGPVSSTQGS GQDESMQETS CTHCGISSKS TPMMRRGPAG PRTLCNACGL KWANKGSLTG 240 VPKVLNVGIQ DPSLKGIEQI DGGVQDSDVV AMGANIAPSS ANGNNSAMTV DRKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21175.2 | 5e-77 | GATA family protein |