PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP029160.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 324aa    MW: 36354.6 Da    PI: 7.7697
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP029160.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM108.11e-33561961128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sgyWk 84 
                  lp+G++F+Ptd+e++ ++L +kv +++      ++++   ++   +i++++P++Lp  v+++ +  +fF++ +k+y+tg+rk+r+++      + +W+
  PCP029160.1  56 LPAGVKFDPTDQEIL-QHLDAKVLSDTrrlhplIDEFIPtLEGEnGICYTHPEKLP-GVNKDGQIRHFFHRPSKAYTTGTRKRRKVHteedgsETRWH 151
                  799***********9.99****999996765442222222333336**********.666777788******************744446555778** PP

          NAM  85 atgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                  +tgk+++vl+ +g+++g kk+Lv+y   gr++k+ekt+Wvmh+y+l
  PCP029160.1 152 KTGKTRPVLV-GGAVKGFKKILVLYtnYGRQRKPEKTNWVMHQYHL 196
                  **********.9*************66589**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MTWCNDSDDE RAIQIIGAPP PNNPNNPNEF RNITCPSCGH HIEFQDQAGI HDLPGLPAGV  60
KFDPTDQEIL QHLDAKVLSD TRRLHPLIDE FIPTLEGENG ICYTHPEKLP GVNKDGQIRH  120
FFHRPSKAYT TGTRKRRKVH TEEDGSETRW HKTGKTRPVL VGGAVKGFKK ILVLYTNYGR  180
QRKPEKTNWV MHQYHLGNNE EEKDGELVVS KVFYQTQPRQ CGSSKDVPAI DHHQGVNIRG  240
GQGHDGLISA TTNPFPLAKK AGLVEYYDPG GPFINYDHHQ HNHNQGGDNR ESPPQLIPNL  300
VVQGDGSSFI RLTSDASKGK LERK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-124NAC family protein