PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP029153.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WOX

Protein Properties

Length: 405aa MW: 44613.5 Da PI: 7.4999

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP029153.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.8	1.6e-17	58	118	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le+ F++ +p ++e++++ ++l ++ +++V++WFqNr+ + k+ PCP029153.1 58 KPRWNPKPEQIRILEAIFNSgVVNPPRDEIRKIRAQLqeygQVGDANVFYWFQNRKSRSKH 118 89***************99***********************************995 PP
2	Wus_type_Homeobox	110.9	6.8e-36	57	119	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi+iLe++++sG+++P+++ei++i+a+L+eyG+++d+NVfyWFQNrk+R+++k PCP029153.1 57 PKPRWNPKPEQIRILEAIFNSGVVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 119 689**********************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MASSNRHWPS MFKSKPADCS THHQWQHDIS PSLVSNSCHQ PSSYSSVGGC EERSPEPKPR 60 WNPKPEQIRI LEAIFNSGVV NPPRDEIRKI RAQLQEYGQV GDANVFYWFQ NRKSRSKHKL 120 RNLHNSSKQQ QTHHRHTHLP ISTPVSAATT LNIINAAAPS SSSSSSEKSS PKAPNNKAFS 180 MGFSTHDVSI NSPIASVNQS TNFFQPHHPH HNEVLPESPF FFPVHQGNIN PNLTQGFCFS 240 ELANVDHVPN HDQTNNNNMG PCTSLLLSEI MNHGGISGKE YHHQEDQIKA MKNVDNQQHL 300 NYNINVTTSP TTAAAASTVA VPTPMFHNIQ GSVGEAGAMA PGGPAKSTVF INDVAFEVGA 360 GPFNVREAFG DDAVLIHSSG QPVLTNEWGL TLHPLHHGSF YYLVY

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MASSNRHWPS MFKSKPADCS THHQWQHDIS PSLVSNSCHQ PSSYSSVGGC EERSPEPKPR  60
WNPKPEQIRI LEAIFNSGVV NPPRDEIRKI RAQLQEYGQV GDANVFYWFQ NRKSRSKHKL  120
RNLHNSSKQQ QTHHRHTHLP ISTPVSAATT LNIINAAAPS SSSSSSEKSS PKAPNNKAFS  180
MGFSTHDVSI NSPIASVNQS TNFFQPHHPH HNEVLPESPF FFPVHQGNIN PNLTQGFCFS  240
ELANVDHVPN HDQTNNNNMG PCTSLLLSEI MNHGGISGKE YHHQEDQIKA MKNVDNQQHL  300
NYNINVTTSP TTAAAASTVA VPTPMFHNIQ GSVGEAGAMA PGGPAKSTVF INDVAFEVGA  360
GPFNVREAFG DDAVLIHSSG QPVLTNEWGL TLHPLHHGSF YYLVY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	4e-64	WOX family protein