PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP029107.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 280aa MW: 30313.7 Da PI: 8.0817

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP029107.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.3	0.00031	142	180	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ +++ L +l+ + +K + a++L +A+ YI+ Lq PCP029107.1 142 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 180 6678889999999999998.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MRQFHQAAKK LENWEEQILN SAQAPNAPAV DVKQENSGNS NGFVYGHHQG NDHIRDFNPS 60 AAALSSLSQI MQSTAASAAS SPKSSCVTSF SNNNMLDFSS KSDVRHPPPH RSSDQCNSTG 120 NGGALKRARV QPSSTPTTFK VRKEKLGDRI TALHQLVSPF GKTDTASVLL EAIGYIRFLQ 180 SQIEALSVPY LGSGSGNMRQ QPQFAVHGER NCMFPEDPGQ LLNDNCMKRK GASEQDPHEE 240 PKKDLRSRGL CLVPVSCTLQ VGSDNGADYW APALGCGGFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29100.1	4e-90	bHLH family protein