PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP028905.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 347aa    MW: 37006 Da    PI: 8.6846
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP028905.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.15e-11280325655
                  HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +++Er RR ri  ++ +L++l+P+     +k  s a++L +Av++Ik Lq
  PCP028905.1 280 SIAERERRTRISGKLKKLQDLVPNM----DKQTSYADMLDLAVQHIKGLQ 325
                  689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MAPRPSTTGL TRYGSAPGSL LNSAVDSVMG AAADREFSSL RPQHLRGHYF SGDGGGDSPS  60
FTSSESSFKV NSSNGSHRDT STTKPLLRSH GLNEIGSSNS SSCSSTSSAA LVRQRSSPAG  120
FLSHLTAPES SGGFSVTRGT GSYRSQGGNN GGPGVTRLKS QLSFSGQDSL SQVSEVSQTA  180
GEGVSSKNGH HSAMHSYPAT SFGMESWDNT NSIVFSAPPS KRAKNMDVDI FDCLNTLESQ  240
FSLPQTSLEM ATVEKLLHIP EDSVPCKIRA KRGCATHPRS IAERERRTRI SGKLKKLQDL  300
VPNMDKQTSY ADMLDLAVQH IKGLQHQIQD LHNDLEHCTC GCKPTAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.14e-94bHLH family protein