PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP028675.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 287aa    MW: 30836.3 Da    PI: 6.3953
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP028675.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.41.8e-182373256
          AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                 ++ GVr+++ +grWvAeI+d      ++ r +lg+f+tae+Aa+a++ a+++l+g+
  PCP028675.1 23 RFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDDAARALRGA 73
                 689******.7*********....4456*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MALREQNDGV RGRKKKSTRG HHRFVGVRQR PSGRWVAEIK DSLQKVRLWL GTFDTAEDAA  60
RAYDDAARAL RGANARTNFE LPQSAGAGGV EEIVEPFSFE AVCGNVVEAD GLLGALRAKL  120
QDGKGITGVL PQPPQGTSGT KPESVSLRGA AAGFVNPHKE DPIVLENQWQ HQVHPCPKPS  180
NPNMVWTNES QAAYEQVPNW STWSNNNMLY VPEQCVMEPP LPIASIGDAK VMAAGTQHLS  240
QIDGNGGSGG GGAWCSDQQQ LLHCDSSNWG GANGSWDPLF YASSVLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-16ERF family protein