PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PCP028646.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 245aa MW: 28241.8 Da PI: 9.1604 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 47.4 | 3.4e-15 | 74 | 125 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++ +hn+ Er RR++iN+ ++ Lr+llP + + kKls + +A +YI +Lq PCP028646.1 74 KKLNHNASERDRRKKINNLYASLRSLLPAD---QTKKLSIPNTISHALKYIPELQ 125 6789**************************...9******************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 245 aa Download sequence |
MLALSPPLFS TIGCSLDQDS ISHENHNYFY SKDITTTNDY QTADSFLHLL PSHHPKVDLD 60 RSTPSTTVTG PMAKKLNHNA SERDRRKKIN NLYASLRSLL PADQTKKLSI PNTISHALKY 120 IPELQKQVEG LNRKREELLS RASKQEDAMH KERKIKSTAR SSQSAVSTYR LNDREVAIQI 180 STFKTHNNLL FEILQHLEEE GLQLENASFF ESYGGRVFYN LHLQVDRTYR LERENLSEKL 240 MSFYA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G56970.1 | 2e-45 | bHLH family protein |