PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP028359.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

CPP

Protein Properties

Length: 452aa MW: 47976.7 Da PI: 6.9205

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP028359.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	42.4	1.4e-13	120	159	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnCk+s+Clk+YCeCfa+g +C+ C+C +C+N+ e+ PCP028359.1 120 KQKQCNCKHSRCLKLYCECFASGIYCDG-CNCVNCCNNVEN 159 89************************.******9875 PP
2	TCR	51.4	2.2e-16	204	243	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e PCP028359.1 204 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFE 243 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MGEGDGADSA PKKAQSDAAA GTATTSSSSS MNDVPAKKLA RQLDFTGVGS APASVAVPEL 60 PKPPLPTEAV PPSLPKPPVV SVPVPVLVPQ QPHTLKLVKP ESPKSRPRPN VDAKDGTPKK 120 QKQCNCKHSR CLKLYCECFA SGIYCDGCNC VNCCNNVENE GARNDAIEAT LERNPNAFRP 180 KIASSPHGAK DTREEAGEVL ILGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCMDCK 240 NFEGSEERQA LFHGDHGNNM VYLQQAANAA ITGAIGSSGY ASSPPVSKKR RGQEFFGPTA 300 KDPSIHRIGQ FQQGNNIRAP APSPQSSVPV NRLGGTAGLG PSKFTYRSLL ADIIQPQDLK 360 ELCSVLVVVA EEAAKTLADQ RNTAEKPTET SLASTTQDML HSQKESDAQN AVADDRSSAN 420 DTDKISPEDS NSDSADVTTG EADVSWNFGI DV

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MGEGDGADSA PKKAQSDAAA GTATTSSSSS MNDVPAKKLA RQLDFTGVGS APASVAVPEL  60
PKPPLPTEAV PPSLPKPPVV SVPVPVLVPQ QPHTLKLVKP ESPKSRPRPN VDAKDGTPKK  120
QKQCNCKHSR CLKLYCECFA SGIYCDGCNC VNCCNNVENE GARNDAIEAT LERNPNAFRP  180
KIASSPHGAK DTREEAGEVL ILGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCMDCK  240
NFEGSEERQA LFHGDHGNNM VYLQQAANAA ITGAIGSSGY ASSPPVSKKR RGQEFFGPTA  300
KDPSIHRIGQ FQQGNNIRAP APSPQSSVPV NRLGGTAGLG PSKFTYRSLL ADIIQPQDLK  360
ELCSVLVVVA EEAAKTLADQ RNTAEKPTET SLASTTQDML HSQKESDAQN AVADDRSSAN  420
DTDKISPEDS NSDSADVTTG EADVSWNFGI DV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-143	CPP family protein