PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP028032.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GATA
Protein Properties Length: 472aa    MW: 51236.4 Da    PI: 5.5441
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP028032.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.56.8e-17185219135
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                  C +C + kTp+WR gp g+ktLCnaCG++y++ +l
  PCP028032.1 185 CLHCAAEKTPQWRTGPMGPKTLCNACGVRYKSGRL 219
                  99*****************************9885 PP

Sequence ? help Back to Top
Protein Sequence    Length: 472 aa     Download sequence    
MELPEFHHGG YFNGGAAKLL PGDKPTGGDF TVEDLLDFSN EDPFVTTAAD GGGFHDPAAD  60
SSAVTAVDSC NSSVSGGEPH FSGNRSFDDS QFSGDLCVPY DDLAELEWLS NFVEDSFSAD  120
MDLQSLQFLS VSNTTKPQTP ETCSSSETPQ NAPLFPSETP LPGKAEASAH APPPGTGSDS  180
SGRKCLHCAA EKTPQWRTGP MGPKTLCNAC GVRYKSGRLV PEYRPAASPT FVSARHSNSH  240
RKVLELRRQK DVQRSHHHHH QFLSPDGTGR DGTEWDGTGR DMTEWNGAGA KMPSDGNKEE  300
EDGDGEVIIL CSTDVERVVR KFTQNSSRRT ARSTRFRRTK RGTERLVPLC SVPSHVPNAY  360
PQQIEKIANA FASVGASVDD SELIFITLNG IPFEYESFVD AIQFRLSSTT IDELYGLFLS  420
KEIQLTNKKH YSSSFPLQAF NLSTGLLPTP THNNKAFAAQ NGSNLTSNQG HG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.11e-54GATA family protein