PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP027965.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | ERF | ||||||||
Protein Properties | Length: 261aa MW: 28952.7 Da PI: 4.9336 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57 | 4.7e-18 | 94 | 143 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr + +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a++ ++g PCP027965.1 94 TYRGVRMRQ-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALTIKG 143 69****998.**********843...6**********************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MEEEQFNFID CEAQTTSSYS NSTTSPSAES PARKISERSS SSSSSNQIQL LDGHEKATTT 60 NDDDDDDQIS QKKAKINNGI NGDGRQQRHP HKPTYRGVRM RQWGKWVSEI REPRKKSRIW 120 LGTFPTPEMA ARAHDVAALT IKGRSAVLNF PELAQELPVP ASALPKDIQV AAAKAAASTY 180 PTRSCRSSSL EAEAEAETEL ISQAVHDSST HDSSSTSPSN SYNDDMFFNL PDLLLDVGHH 240 SDPGFRFSVP WLDEEPEFLW Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16750.1 | 6e-43 | ERF family protein |