PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP027941.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 182aa MW: 21631.4 Da PI: 6.5207 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 66.6 | 7.3e-21 | 10 | 143 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk...leleevikevdiykv.ePwdLpkkvkaeek...ewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 p f F+Ptd+e++ +L + +++ + +e ++e d++++ ePw++ +++ ++++ ++yfF++ ++ +tg r +r + +g+W+++ +k v PCP027941.1 10 PYAFCFQPTDQEIIRSFLYRMGVKRElllQPYNEYVHEEDLFDFkEPWEIWEEYGGDDHfnqDLYFFCELERLPPTGLRIRRNIGEGIWNQKQPTKLV 107 67899***************988888786666678*******9889****86655554454478********************************** PP NAM 93 lskkgel..vglkktLvfykgrapkgektdWvmheyrl 128 ++++++ +g kk + +y++r ++ ++ W+++ey+l PCP027941.1 108 YNENRHPnpMGRKK-MFLYENRGSE-QHGGWILDEYSL 143 *9854443266555.5566666666.799*******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence |
MAGPLVPLVP YAFCFQPTDQ EIIRSFLYRM GVKRELLLQP YNEYVHEEDL FDFKEPWEIW 60 EEYGGDDHFN QDLYFFCELE RLPPTGLRIR RNIGEGIWNQ KQPTKLVYNE NRHPNPMGRK 120 KMFLYENRGS EQHGGWILDE YSLLVGADGS DQTASKDRYD FPFVICRLRK NDRSGGKKKR 180 NN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12260.1 | 1e-13 | NAC family protein |