PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP027663.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 1227aa MW: 136187 Da PI: 6.6267

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP027663.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	59.1	1.4e-18	566	699	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiy.kvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWkatgk 88 +p GfrFhPtd+el++++L ++ +++ ++ ++ i e+d++ k+ Pw +++ + e++++yfF++ +++++ r +r + + g+W+++ + PCP027663.1 566 MPLGFRFHPTDQELISFFLYNRFFHREslmadCNNFNLIYEFDLFgKTPPWVVWENFGGpglEDQDLYFFCQLKTRSQ--ARIKReIDAGGTWSESNS 661 699*****************99998788765666789873678899865443344488999**988764..68888456689998766 PP NAM 89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 k+v++ ++++ g k+ L + k + + dW+++ey++ PCP027663.1 662 -KPVKDLqNEKTLGKKRNLRYEK--EGCEHDGDWLLEEYSI 699 .66665438889******984..4444589*****85 PP

Sequence ? help Back to Top
Protein Sequence Length: 1227 aa Download sequence
MGVAMAGTWA HVPLPKVLCS TAVHGSVDDF SGQLSSDPSR PVAARGGTRG TSVESDPILL 60 SSSYSPLAEY LFLLFLRIVI FMASSPLGSG VSQNVLILVF GNIGVGACQS YARKRLQRSE 120 KTKRYPPVVT TFLHTLVNFH RLHDFITEFA YKHKTFRALN LFVNYVVTAD PANIEYILKT 180 NFANYGRGLY NYDILTDALG NGIFAVDGEK WIHQRKLSSY EISTKVAKDF SNGVFKTKAV 240 KLAGIISKAA TCDQVIEIQD LIMKAGLDSV VKILLGMEVD TMYGTNEEGT RFAHAFDEAN 300 KLTLYRFVDF SWKIKRFFNI GSEAKLRNDI KLMDQFIYKL INRKIETSHN SSDDELPALK 360 KGDMISRLLE VKGNDPKYLR DLILSLIVAG KDSTASTITW VIYMLCKHPH MQEKVAKEVR 420 EAANLKDDSS IVELADSLNE EALNKMQYLY AALTETLRLY PAIPLNAKIC SSDDTWPDGF 480 SVKKGDMVAY NAYSMGRMTY LWGDDAQEFR PERWLDENGV FQEESPFKFI AFSRNPNEVL 540 TMEEEGYGGN VPLGYYENPL LGSNGMPLGF RFHPTDQELI SFFLYNRFFH RESLMADCNN 600 FNLIYEFDLF GKTPPWVVWE NFGGPGLEDQ DLYFFCQLKT RSQARIKREI DAGGTWSESN 660 SKPVKDLQNE KTLGKKRNLR YEKEGCEHDG DWLLEEYSIL PSVVAGADDS DHEIGKVVLC 720 RLKKNSRSGN KKNCSNSTQQ VNEQPAKKRA RKEVKEKPAK KKARKEVKQR PAKKKARNEV 780 GSQNTTSVIT HTVEELQNCP STSSAPVVPF DESNYKMISD AINHDQQCIS NIDGSTMPTN 840 FSDHDYVPVS FASECGEFLL KDEDFLLKNG EDMFFDLDDL LPPLDCGSAC AYLVFSCFLS 900 GFVYPVVAHW VWSSTGWLSP NSSNLLLGSG AIDFAGSGVV HLVGGVAGLW GSFIEGPRVG 960 RFDTFGKATP IRGHNATLVV LGTFLLWFGW FGFNPGSFDK ILVAYPDTSD QGNWTGVGRT 1020 AVATTLAGST AGIVTLFGRR LLVGHWDALD VCNGVLGGFV AITSGCAVVE PWAAVVCGFF 1080 AACVLIGFNI LAVKLQFDDP LEATQLHGGC GAWGLIFTGL FAKEEFVVQA YNAGAVGTVR 1140 PYGLFMGGGW RLLGAQVAEL LAIVGWVSLT MGPLFYTLHK LKILRISVAD EIAGLDVSTH 1200 GGHAYVHKEE HQPRFYADYV RIQGNRS

Sequence ? help Back to Top

Protein Sequence Length: 1227 aa Download sequence

MGVAMAGTWA HVPLPKVLCS TAVHGSVDDF SGQLSSDPSR PVAARGGTRG TSVESDPILL  60
SSSYSPLAEY LFLLFLRIVI FMASSPLGSG VSQNVLILVF GNIGVGACQS YARKRLQRSE  120
KTKRYPPVVT TFLHTLVNFH RLHDFITEFA YKHKTFRALN LFVNYVVTAD PANIEYILKT  180
NFANYGRGLY NYDILTDALG NGIFAVDGEK WIHQRKLSSY EISTKVAKDF SNGVFKTKAV  240
KLAGIISKAA TCDQVIEIQD LIMKAGLDSV VKILLGMEVD TMYGTNEEGT RFAHAFDEAN  300
KLTLYRFVDF SWKIKRFFNI GSEAKLRNDI KLMDQFIYKL INRKIETSHN SSDDELPALK  360
KGDMISRLLE VKGNDPKYLR DLILSLIVAG KDSTASTITW VIYMLCKHPH MQEKVAKEVR  420
EAANLKDDSS IVELADSLNE EALNKMQYLY AALTETLRLY PAIPLNAKIC SSDDTWPDGF  480
SVKKGDMVAY NAYSMGRMTY LWGDDAQEFR PERWLDENGV FQEESPFKFI AFSRNPNEVL  540
TMEEEGYGGN VPLGYYENPL LGSNGMPLGF RFHPTDQELI SFFLYNRFFH RESLMADCNN  600
FNLIYEFDLF GKTPPWVVWE NFGGPGLEDQ DLYFFCQLKT RSQARIKREI DAGGTWSESN  660
SKPVKDLQNE KTLGKKRNLR YEKEGCEHDG DWLLEEYSIL PSVVAGADDS DHEIGKVVLC  720
RLKKNSRSGN KKNCSNSTQQ VNEQPAKKRA RKEVKEKPAK KKARKEVKQR PAKKKARNEV  780
GSQNTTSVIT HTVEELQNCP STSSAPVVPF DESNYKMISD AINHDQQCIS NIDGSTMPTN  840
FSDHDYVPVS FASECGEFLL KDEDFLLKNG EDMFFDLDDL LPPLDCGSAC AYLVFSCFLS  900
GFVYPVVAHW VWSSTGWLSP NSSNLLLGSG AIDFAGSGVV HLVGGVAGLW GSFIEGPRVG  960
RFDTFGKATP IRGHNATLVV LGTFLLWFGW FGFNPGSFDK ILVAYPDTSD QGNWTGVGRT  1020
AVATTLAGST AGIVTLFGRR LLVGHWDALD VCNGVLGGFV AITSGCAVVE PWAAVVCGFF  1080
AACVLIGFNI LAVKLQFDDP LEATQLHGGC GAWGLIFTGL FAKEEFVVQA YNAGAVGTVR  1140
PYGLFMGGGW RLLGAQVAEL LAIVGWVSLT MGPLFYTLHK LKILRISVAD EIAGLDVSTH  1200
GGHAYVHKEE HQPRFYADYV RIQGNRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39820.1	4e-12	NAC family protein