PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP027655.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 447aa    MW: 50528.1 Da    PI: 4.5625
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP027655.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM64.14.3e-20251521128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 
                  +p GfrFhPtd+el++++L ++v + +  + + i e+d++ k+ Pw   +++ +   e++++yfF++ + +++   r +r + + g+W+++ + k+v+
  PCP027655.1  25 MPLGFRFHPTDQELISFFLYNRVLHGDYCE-NLIYEFDLFgKTPPWVVWENFGGpglEDQDLYFFCQLKPRSQ--ARIKReIDAGGTWSESNS-KPVK 118
                  699***********************9776.88****9873678899865443344488999*****988765..688884566899*98765.6776 PP

          NAM  94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                  +  +++++g k+ L + k  +   +  +W+++ey++
  PCP027655.1 119 DMqNEKAIGKKRNLRYEK--EGCEHDGEWLLEEYSI 152
                  6548888********984..4444589*******85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 447 aa     Download sequence    
MEEEGYGGIV PLGFYENQLL GSNGMPLGFR FHPTDQELIS FFLYNRVLHG DYCENLIYEF  60
DLFGKTPPWV VWENFGGPGL EDQDLYFFCQ LKPRSQARIK REIDAGGTWS ESNSKPVKDM  120
QNEKAIGKKR NLRYEKEGCE HDGEWLLEEY SILPSVFGGA DDSDHXXXXX XXXXADRDLK  180
IKICTSSANS SLEARRASNV KLTPEKEGCE HDGEWLLEEY SILPSVFGGA DDSDHEIGKV  240
VLCRLKKNSR SGNKKNFSNS TQQVNEQPAK KRAREEVKEK PAKKRARKEV KEKPAKTKAT  300
NKVGSQNTTS VITHTIEELQ NCPSTSSAPV LPFDESNYKM ISDAINHDQQ CISNIDGSTM  360
LANFSDHDHV PKSLVSEGDD SLLKDEDLLF DNGEDMFFDL DDLFAPLECE SAWSQEKLPQ  420
IDETQVPLPL DGMNCWNDCL WMGNCVQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39820.17e-15NAC family protein