PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP027594.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GATA
Protein Properties Length: 354aa    MW: 38305.1 Da    PI: 6.3102
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP027594.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.12.1e-17257290134
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                  C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  PCP027594.1 257 CLHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 290
                  99*****************************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MEKMIGPNYI DDIDCGSLFD TIDDLLDFPT DDVESVLGPA PDCNAAFNSS SLWPSHSGSL  60
QPPNDAVFSC NSASDLSAEL DVPIEDIVQL EWLSNFCEDS FSGGSLTINK PDSSFINKES  120
SHQQFQTSSP ISVLDSSSSC SVEKNVPQSP GAVVPGKRGR ARSKRPRPAT FNPRSAIQLI  180
SPASSVTEAE ALQHQPLLPP KVHSDSENFA ESRPVIKIPK QASGEQKKKK KIKLTLPQAP  240
AEGNQSSGTT QGAVRKCLHC EITKTPQWRA GPMGPKTLCN ACGVRYKSGR LFPEYRPAAS  300
PTFVPALHSN SHKKVIEMRN KGGELIPFGE TTTAMTETPE LIPNTNHSIS LDYM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1164168KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.25e-56GATA family protein