PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP027574.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 172aa MW: 19911.8 Da PI: 9.7618 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 53.4 | 4.4e-17 | 17 | 69 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + ++t++q++ Le+ F+ n+++ e++ LAk+l ++ rqV +W+qN+Ra++k PCP027574.1 17 KKRLTQDQVKLLERSFAFNKKLEPERKLLLAKQLAIPPRQVAIWYQNKRARWK 69 5679************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 104.6 | 7.7e-34 | 16 | 107 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +k+rl+++qvklLE+sF ++kLeperK la++L + prqva+W+qn+RAR+kt+ lE +y+a+++++++ +e++rLek+ve+Lr elk+ PCP027574.1 16 NKKRLTQDQVKLLERSFAFNKKLEPERKLLLAKQLAIPPRQVAIWYQNKRARWKTQSLELNYNAIQAKLESALAEKRRLEKDVERLRGELKR 107 79*************************************************************************************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MDFFQTSNHK NQFQHNKKRL TQDQVKLLER SFAFNKKLEP ERKLLLAKQL AIPPRQVAIW 60 YQNKRARWKT QSLELNYNAI QAKLESALAE KRRLEKDVER LRGELKRAHE VVLALNQQVQ 120 VFPPNPVICS VFDSSNCSDE GGVGSSSMQV QPHGDHEVKQ LEELYACLIG MQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53980.1 | 1e-37 | HD-ZIP family protein |