PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP026937.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | ERF | ||||||||
Protein Properties | Length: 210aa MW: 22477.8 Da PI: 5.0144 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.8 | 1e-16 | 35 | 84 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+G+r+++ +g+Wv+eIr+p+ + r++lg+f t+e+Aa a++ a+ +l+g PCP026937.1 35 TYRGIRRRS-SGKWVSEIREPK----KpNRIWLGTFSTPEMAAVAYDVAAIALKG 84 69****888.8*********94....468**********************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MYTTNTTTTS SSTGSTTTTS SSTGSTTTST GRHPTYRGIR RRSSGKWVSE IREPKKPNRI 60 WLGTFSTPEM AAVAYDVAAI ALKGQGAELN FPNSASSLPV PASTSPRDIQ AAASSAAAAM 120 GVAIDHGSYS RSEVQGDQQD AHQAHKTVDE ADRLMLNQEF VDEELIFNMP NVLVNMAEGM 180 LLSPPRLDIA GDDAIGADQE QGDHNLWKFN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36450.1 | 8e-43 | ERF family protein |