PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP026893.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 512aa MW: 56910.6 Da PI: 8.2659

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP026893.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	77.7	1.4e-24	152	205	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k +++Wt+eL +rF+ea++ + G +kA+Pk+ile+m+v+gLt+e+v+SHLQkYR+ PCP026893.1 152 KHKVEWTSELQDRFLEAINYI-GLDKAVPKRILEVMNVEGLTRENVASHLQKYRM 205 6799***************.******************************7 PP
2	Myb_DNA-binding	30.6	7.7e-10	155	204	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT e+++++++a++ G + +k+I + m+ +g+t++++ s++qky+ PCP026893.1 155 VEWTSELQDRFLEAINYIGLDkaVPKRILEVMNvEGLTRENVASHLQKYR 204 68***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MRRPKRGSSS MCRDKNLKGP QSDIMPTSNI PIRLRILVLD IDADFLTFIS GLLKLLKHEV 60 ASADNSESTI LAALENGAIH YTVKPVCFSD VKNLWGLVLG VNETTRLDSN NNITNRRASV 120 DGKSSSSTDG SNNSKRKRSS EGGKSTYIST KKHKVEWTSE LQDRFLEAIN YIGLDKAVPK 180 RILEVMNVEG LTRENVASHL QKYRMFLRKV AAKISVSKLS VERAQHTRRA LLYQNILVEG 240 QASTLQQRRS FHENFELLVN QNTAWLLNRL RCGANGHEAS SSRCLPRSGS YNTRQNPYVL 300 NGQTRSGKQP LMMNTPNRFQ PANYCGIFQS NSAQRNWSIT NTSADVAYNF GSNNANGVKI 360 GTNIPNQILF SSSWDTSNGV KNYVCGASSS QLSPMFVEGN NIRQENVNAL ALENPLQQQQ 420 QQYGGTDLVN ASNNSSSHVT GGKGKQVMNS EQDTSDDFDS ITLDELNSEP ATCDKQESQA 480 DMMDLEFDGD GLNFVDLSPD EDWEKIMESL LK

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MRRPKRGSSS MCRDKNLKGP QSDIMPTSNI PIRLRILVLD IDADFLTFIS GLLKLLKHEV  60
ASADNSESTI LAALENGAIH YTVKPVCFSD VKNLWGLVLG VNETTRLDSN NNITNRRASV  120
DGKSSSSTDG SNNSKRKRSS EGGKSTYIST KKHKVEWTSE LQDRFLEAIN YIGLDKAVPK  180
RILEVMNVEG LTRENVASHL QKYRMFLRKV AAKISVSKLS VERAQHTRRA LLYQNILVEG  240
QASTLQQRRS FHENFELLVN QNTAWLLNRL RCGANGHEAS SSRCLPRSGS YNTRQNPYVL  300
NGQTRSGKQP LMMNTPNRFQ PANYCGIFQS NSAQRNWSIT NTSADVAYNF GSNNANGVKI  360
GTNIPNQILF SSSWDTSNGV KNYVCGASSS QLSPMFVEGN NIRQENVNAL ALENPLQQQQ  420
QQYGGTDLVN ASNNSSSHVT GGKGKQVMNS EQDTSDDFDS ITLDELNSEP ATCDKQESQA  480
DMMDLEFDGD GLNFVDLSPD EDWEKIMESL LK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	3e-25	ARR-B family protein