PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP026810.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 347aa    MW: 38683.7 Da    PI: 4.6912
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP026810.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.4e-19122172155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  ++++GVr+++ +g+W+AeIrdp     r  r +lg+f+taeeAa  +++a+ +l+g
  PCP026810.1 122 KKFRGVRQRP-WGKWAAEIRDPL----RrVRLWLGTFDTAEEAAVVYDNAAIQLRG 172
                  59********.**********72....45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MNHPAVKYTQ HRSHTKMVAN SAETAEFELA RPRVVRIMVT DGNATDSSSD DEAEESSFPG  60
ARHRVKRFVN EITIESCSNR DTDSAVWRSR TTRTGRKRPA GKSRAQARGR RDLKAIPAPA  120
GKKFRGVRQR PWGKWAAEIR DPLRRVRLWL GTFDTAEEAA VVYDNAAIQL RGPDALTNFA  180
PPAAISLPDV KPEVSSGFYS GDESHNHLCS PTSVLRCPSP SNEEGPSNEE GESPCPKQVP  240
EAAEARNVRE DSCVSESLSE FSDYTSFETF IPDDMFNFET SIPDFFEETS LRDDVGILKE  300
EMTDFGNLGE MFVDSVWDFG FGSSPWCTDD YFKDIGDFFS SDPLVAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.11e-57ERF family protein