PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP026706.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Dof

Protein Properties

Length: 522aa MW: 56835.6 Da PI: 6.4505

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP026706.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.1	1.1e-39	164	224	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s PCP026706.1 164 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSA 224 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 522 aa Download sequence
MFDEKKIKEK KSVANMSEAA KDPAINLFGK TISVLNSGGD SVGVTRAPEP DPSSGTVAEE 60 TVDQDHAASS SSNSTPEVNA HRDREEKEVN DNKDTLGEKP IQKTQENGIP TLSSEELANP 120 DAASRIGVNR ESPVEKESAT LKTEKTEEEQ SETSNSQDKT LKKPDKILPC PRCNSMDTKF 180 CYYNNYNVNQ PRHFCKNCQR YWTAGGTMRN VPVGAGRRKN KNSASHYRHI TVSEAMPNAQ 240 ADGLNGVHHP SVQPNGTVLT FCRDTPLFES VASVRHLADK NIQNCTHNEF QKPEGLRTPA 300 SYGAGVTGDD HLTGSTATDS NSKDEACKFG SQEQVMHNYQ GFPPQIPCFP GAPWPYPWNS 360 PIAPPAFCPP GYPMSFYPAA AYWGCAVQGT WSIPWLPPPL SSNNSASSSG PNSPTLGKHS 420 REENTVKQNS SEEEVPPREK SAERNLWIPK TLRIDDPGEA AKSSIWATLG IKNDKADSVS 480 SGGLFKAFQS KGDQKNHTSD ASQVLQANPA ALSRSLNFQE TS

Sequence ? help Back to Top

Protein Sequence Length: 522 aa Download sequence

MFDEKKIKEK KSVANMSEAA KDPAINLFGK TISVLNSGGD SVGVTRAPEP DPSSGTVAEE  60
TVDQDHAASS SSNSTPEVNA HRDREEKEVN DNKDTLGEKP IQKTQENGIP TLSSEELANP  120
DAASRIGVNR ESPVEKESAT LKTEKTEEEQ SETSNSQDKT LKKPDKILPC PRCNSMDTKF  180
CYYNNYNVNQ PRHFCKNCQR YWTAGGTMRN VPVGAGRRKN KNSASHYRHI TVSEAMPNAQ  240
ADGLNGVHHP SVQPNGTVLT FCRDTPLFES VASVRHLADK NIQNCTHNEF QKPEGLRTPA  300
SYGAGVTGDD HLTGSTATDS NSKDEACKFG SQEQVMHNYQ GFPPQIPCFP GAPWPYPWNS  360
PIAPPAFCPP GYPMSFYPAA AYWGCAVQGT WSIPWLPPPL SSNNSASSSG PNSPTLGKHS  420
REENTVKQNS SEEEVPPREK SAERNLWIPK TLRIDDPGEA AKSSIWATLG IKNDKADSVS  480
SGGLFKAFQS KGDQKNHTSD ASQVLQANPA ALSRSLNFQE TS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	6e-87	Dof family protein