PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP026548.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Dof

Protein Properties

Length: 350aa MW: 37102 Da PI: 8.6981

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP026548.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124	4.9e-39	64	122	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk++ PCP026548.1 64 TENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKSV 122 67899***************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MIQELFGGAG LNNIAGGGER KSFSFHGGTT SSPSLSPSPS PSCSTTTTGT GTATTTTTTG 60 LSNTENLRCP RCDSSNTKFC YYNNYNLTQP RHFCKTCRRY WTKGGALRNV PIGGGCRKNK 120 SVTVSTASIG KTAAGKLKTV VSEIGRSGLG GGFDQEVQAS PILWGSPQNS HLLALLRSSH 180 QNPNPNPNQL CNSVNVKEEG GMNNMIGSHM MTTEPAAMST ARTLGLDPVC QAPSLGLCSS 240 FWRNNNNQNQ PPPSHHQQNG FIVGHEVQSS NIGIQELFQR LRSTTSQSGS YYSDHLNNVV 300 MSSSSSSLSS SSTSSILDSA PVVGGGEMSY WNPAFTAWSS DLPTTNGAYH

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MIQELFGGAG LNNIAGGGER KSFSFHGGTT SSPSLSPSPS PSCSTTTTGT GTATTTTTTG  60
LSNTENLRCP RCDSSNTKFC YYNNYNLTQP RHFCKTCRRY WTKGGALRNV PIGGGCRKNK  120
SVTVSTASIG KTAAGKLKTV VSEIGRSGLG GGFDQEVQAS PILWGSPQNS HLLALLRSSH  180
QNPNPNPNQL CNSVNVKEEG GMNNMIGSHM MTTEPAAMST ARTLGLDPVC QAPSLGLCSS  240
FWRNNNNQNQ PPPSHHQQNG FIVGHEVQSS NIGIQELFQR LRSTTSQSGS YYSDHLNNVV  300
MSSSSSSLSS SSTSSILDSA PVVGGGEMSY WNPAFTAWSS DLPTTNGAYH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	8e-34	Dof family protein